BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B11SP1|AL429349
(982 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1742 842 0.0
3x_Contig236 594 e-169
>3x_Contig1742
Length = 17167
Score = 842 bits (424), Expect = 0.0
Identities = 426/428 (99%)
Strand = Plus / Plus
Query: 1 atctacttcaaatgaccttaccatgacttataatttacgataatgcttgtyttatgaacc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 16740 atctacttcaaatgaccttaccatgacttataatttacgataatgcttgttttatgaacc 16799
Query: 61 ttctaactttttttcccctcctcactccatttttctttcattctgcatgataacatcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16800 ttctaactttttttcccctcctcactccatttttctttcattctgcatgataacatcgat 16859
Query: 121 cagcttttgaacggaaaacatctctttttgttcgcagcaggtttgacttttatgttccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16860 cagcttttgaacggaaaacatctctttttgttcgcagcaggtttgacttttatgttccct 16919
Query: 181 cataacggtcataatggtctcgccacaatgaccctacttaattcccatgtaaataaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16920 cataacggtcataatggtctcgccacaatgaccctacttaattcccatgtaaataaactt 16979
Query: 241 gcacatatgtatatgaattctctaccatgatccaaaatgaaaggacctttctttctctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16980 gcacatatgtatatgaattctctaccatgatccaaaatgaaaggacctttctttctctta 17039
Query: 301 ttaaaacggtctgtcatccgttaaggtacgtccgagagcatgaacgaaacgcataagtva 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 17040 ttaaaacggtctgtcatccgttaaggtacgtccgagagcatgaacgaaacgcataagtaa 17099
Query: 361 gaacatccaacccctgcaggctctacatctttagtatactctgaactcaatcttccatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17100 gaacatccaacccctgcaggctctacatctttagtatactctgaactcaatcttccatca 17159
Query: 421 gccactcc 428
||||||||
Sbjct: 17160 gccactcc 17167
>3x_Contig236
Length = 1924
Score = 594 bits (299), Expect = e-169
Identities = 338/349 (96%), Gaps = 2/349 (0%)
Strand = Plus / Minus
Query: 628 gatgagttcgaacaatatgtggcagttgatatattgcgtcctctttggaatcctaccgtt 687
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 1924 gatgagttcgaacaatatgttgcaggtgatatattgcgtcctctttggaatcctaccgtt 1865
Query: 688 ccaagttcgcgtatttcttaattaggttttttgtttaaagcttaaaggaatttttataaa 747
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1864 ccaagttcgcgtatttcttaattaggttttttgtttaaagcttaaaggaagttttataaa 1805
Query: 748 aacaattgaaatcaaaagaaatagtttgtttatatatggacttataatcaaacgtctaaa 807
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||
Sbjct: 1804 aacaattgaaatcaaaagaaatagtttggttatatatggactgataatcaaacgtctgaa 1745
Query: 808 gatcctgcactgttgtaggcttctagcttgaacatctgattaaattgggtacatttggcg 867
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1744 gatcctgcactgttgtaggcttctagcttgaacatctgattaaattgggtaccattggcg 1685
Query: 868 gagagggactgtgcagttagattccaggaaatttcgaatttcaagagtcttttttttttt 927
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1684 gagagggactgtgcagttagattccaggaaatttcgaatttcaagagtcttt-ttttttt 1626
Query: 928 tagttcttcgagggratactcttcaagtttgtaaaa-caaatctcagga 975
|||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 1625 tagttcttcgagggaatactcttcaagtttgtaaaaccaaatctcagga 1577
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,011
Number of Sequences: 1807
Number of extensions: 14011
Number of successful extensions: 99
Number of sequences better than 1.0e-20: 2
length of query: 982
length of database: 10,358,551
effective HSP length: 16
effective length of query: 966
effective length of database: 10,329,639
effective search space: 9978431274
effective search space used: 9978431274
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)